Basic Information
Locus ID:
BVRB_1g000880
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 967853 | 977519 | - | BVRB_1g000880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.73 | 58,146.72 Da | 58.92 | 79.46 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 369 | 432 | 2.35E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 219 | 468 | 5.9E-8 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27120.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_048496801.1 | - | 0 |
| F4JEX5 | ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana OX=3702 GN=FIGL1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803LVP4 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_12150, gene_4483, gene_7164 |
| Amaranthaceae | Atriplex hortensis | 9 | Ah004682, Ah016056, Ah032331, Ah032336, Ah034082, Ah034094 ... |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_1g000880, BVRB_9g216740 |
| Amaranthaceae | Salicornia bigelovii | 13 | Sbi_jg40828, Sbi_jg40829, Sbi_jg61155, Sbi_jg61156 ... |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg22918, Seu_jg22926, Seu_jg22927 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022496 |
| Amaranthaceae | Suaeda glauca | 9 | Sgl23009, Sgl28119, Sgl32537, Sgl37813, Sgl70843, Sgl70846 ... |
| Amaranthaceae | Chenopodium album | 16 | gene:ENSEOMG00000011497, gene:ENSEOMG00000016296 ... |
| Amaranthaceae | Chenopodium quinoa | 12 | CQ.Regalona.r1.1BG0002070, CQ.Regalona.r1.2BG0007820 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu30353 |