Basic Information
Locus ID:
BVRB_1g000560
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 636362 | 647275 | + | BVRB_1g000560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 192,495.25 Da | 47.22 | 76.86 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1416 | 1676 | 1.05857E-132 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 205 | 472 | 4.84565E-92 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1622 | 1674 | 2.8E-8 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1454 | 1620 | 3.2E-32 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 222 | 457 | 5.7E-20 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 268 | 439 | 2.41E-26 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1405 | 1676 | 1.5E-76 | - |
| Gene3D | G3DSA:3.30.810.10 | - | 1537 | 1677 | 4.1E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 267 | 439 | 9.5E-33 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1364 | 1535 | 2.1E-33 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1394 | 1677 | 6.4E-80 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1356 | 1676 | 55.462017 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1200 | 1237 | - | - |
| Coils | Coil | Coil | 941 | 961 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_010673144.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A803M574 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology