halophFGD

Basic Information

Locus ID: BH09.964

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Alkaline and neutral invertase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH09	17811614	17815344	+	BH09.964

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.88	69,245.28 Da	61.90	80.86	-0.41

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12899	Alkaline and neutral invertase	273	576	8.5E-152	IPR024746
Pfam	PF12899	Alkaline and neutral invertase	178	267	2.5E-32	IPR024746
SUPERFAMILY	SSF48208	Six-hairpin glycosidases	178	569	5.19E-42	IPR008928
Gene3D	G3DSA:1.50.10.10	-	308	571	9.5E-10	IPR012341
MobiDBLite	mobidb-lite	consensus disorder prediction	152	166	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	173	-	-

Gene Ontology

Biological Process:

GO:0005975 (carbohydrate metabolic process)

Molecular Function:

GO:0033926 (endo-alpha-N-acetylgalactosaminidase activity)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT5G22510.1	alkaline/neutral invertase. Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio.	1.03E-263
RefSeq	XP_004975545.1	neutral/alkaline invertase 3, chloroplastic [Setaria italica]	6.0399999507112E-317
Swiss-Prot	Q6H6N5	Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIN3 PE=2 SV=1	1.71E-282
TrEMBL	K3Y644	Alkaline/neutral invertase OS=Setaria italica OX=4555 GN=101757111 PE=3 SV=1	1.3699999998468E-315

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg16461, jg28272, jg29992, jg5619
Aizoaceae	Mesembryanthemum crystallinum	4	gene_10247, gene_2723, gene_6784, gene_8401
Amaranthaceae	Atriplex hortensis	3	Ah005342, Ah007035, Ah019987
Amaranthaceae	Beta vulgaris	1	BVRB_4g080050
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg17561, Sbi_jg26994, Sbi_jg33558, Sbi_jg36017 ... Sbi_jg517, Sbi_jg62210
Amaranthaceae	Salicornia europaea	3	Seu_jg4101, Seu_jg814, Seu_jg8262
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00002937, GOSA_00003633, GOSA_00007417, GOSA_00027825
Amaranthaceae	Suaeda glauca	8	Sgl01588, Sgl06757, Sgl19325, Sgl21026, Sgl24116, Sgl29295 ... Sgl73271, Sgl76792
Amaranthaceae	Chenopodium album	12	gene:ENSEOMG00000007818, gene:ENSEOMG00000009886 ... gene:ENSEOMG00000010920, gene:ENSEOMG00000014735, gene:ENSEOMG00000028920, gene:ENSEOMG00000029007, gene:ENSEOMG00000030010, gene:ENSEOMG00000036992, gene:ENSEOMG00000039773, gene:ENSEOMG00000041490, gene:ENSEOMG00000042111, gene:ENSEOMG00000044468
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.3AG0012910, CQ.Regalona.r1.3BG0012950 ... CQ.Regalona.r1.4AG0004610, CQ.Regalona.r1.4AG0013000, CQ.Regalona.r1.4BG0004620, CQ.Regalona.r1.4BG0014570, CQ.Regalona.r1.9BG0005260
Anacardiaceae	Pistacia vera	4	pistato.v30057010, pistato.v30080870, pistato.v30169810 ... pistato.v30232690
Apiaceae	Apium graveolens	5	Ag11G04364, Ag1G00550, Ag6G02013, Ag6G02279, Ag9G01926
Arecaceae	Cocos nucifera	2	COCNU_01G000780, COCNU_16G004870
Arecaceae	Phoenix dactylifera	3	gene-LOC103706133, gene-LOC103709680, gene-LOC103710534
Asparagaceae	Asparagus officinalis	4	AsparagusV1_02.2225.V1.1, AsparagusV1_02.852.V1.1 ... AsparagusV1_07.1207.V1.1, AsparagusV1_08.3253.V1.1
Asteraceae	Flaveria trinervia	5	Ftri13G16079, Ftri16G05451, Ftri18G12267, Ftri2G13905 ... Ftri8G21164
Brassicaceae	Arabidopsis thaliana	4	AT1G56560.1, AT3G05820.1, AT3G06500.1, AT5G22510.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10012973m.g.v1.0, Thhalv10020219m.g.v1.0 ... Thhalv10020291m.g.v1.0, Thhalv10023341m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp2g06210.v2.2, Sp3g04680.v2.2, Sp3g05450.v2.2 ... Sp6g22750.v2.2
Brassicaceae	Brassica nigra	4	BniB01g057140.2N, BniB02g041060.2N, BniB02g060110.2N ... BniB07g059970.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq05G1201, Ceq05G1766, Ceq06G1096, Ceq09G1389
Casuarinaceae	Casuarina glauca	4	Cgl05G1212, Cgl05G1757, Cgl06G1136, Cgl09G1480
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno04g06560, gene.Cymno05g05980, gene.Cymno07g00150
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate01g16680, gene.Thate02g01550, gene.Thate02g16200 ... gene.Thate09g02500
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG02.1264, evm.TU.LG03.2569, evm.TU.LG09.723 ... evm.TU.LG11.1148
Plantaginaceae	Plantago ovata	3	Pov_00015840, Pov_00022553, Pov_00038152
Plumbaginaceae	Limonium bicolor	7	Lb1G00711, Lb1G05638, Lb1G06745, Lb3G18925, Lb3G18926 ... Lb3G19855, Lb6G31435
Poaceae	Echinochloa crus-galli	12	AH01.3839, AH02.1552, AH07.2025, AH09.894, BH01.4182 ... BH02.1617, BH07.1992, BH09.964, CH01.4468, CH02.1771, CH07.1843, CH09.1080
Poaceae	Eleusine coracana subsp. coracana	7	gene-QOZ80_1AG0015580, gene-QOZ80_1BG0064400 ... gene-QOZ80_2AG0132690, gene-QOZ80_2BG0188080, gene-QOZ80_3AG0246010, gene-QOZ80_3BG0282130, gene-QOZ80_4AG0318670
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.2HG0165830.1, HORVU.MOREX.r3.3HG0258530.2 ... HORVU.MOREX.r3.4HG0381060.1
Poaceae	Lolium multiflorum	3	gene-QYE76_022691, gene-QYE76_052828, gene-QYE76_068395
Poaceae	Oryza coarctata	7	Oco01G009530, Oco02G009880, Oco03G011470, Oco04G011900 ... Oco06G014510, Oco07G005160, Oco08G005130
Poaceae	Oryza sativa	4	LOC_Os01g22900.1, LOC_Os02g32730.1, LOC_Os03g20020.1 ... LOC_Os04g33490.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G373300, gene-BS78_04G150300
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0107891, Pt_Chr0302846, Pt_Chr0302916, Pt_Chr0603594 ... Pt_Chr0705135
Poaceae	Sporobolus alterniflorus	12	Chr01G033190, Chr02G022680, Chr04G009780, Chr05G013580 ... Chr07G001940, Chr09G015340, Chr0G019710, Chr0G029250, Chr12G006360, Chr13G011260, Chr15G012220, Chr23G013690
Poaceae	Thinopyrum elongatum	4	Tel2E01G521100, Tel3E01G355600, Tel3E01G460800 ... Tel4E01G323900
Poaceae	Triticum dicoccoides	6	gene_TRIDC2AG042400, gene_TRIDC2BG045520 ... gene_TRIDC3AG028020, gene_TRIDC3BG035130, gene_TRIDC4AG016560, gene_TRIDC4BG034250
Poaceae	Triticum aestivum	9	TraesCS2A02G292900.1, TraesCS2B02G309800.1 ... TraesCS2D02G291100.2, TraesCS3A02G195400.1, TraesCS3B02G232600.1, TraesCS3D02G200800.1, TraesCS4A02G124800.1, TraesCS4B02G179600.2, TraesCS4D02G181200.1
Poaceae	Zea mays	4	Zm00001eb015090_P005, Zm00001eb131170_P001 ... Zm00001eb181370_P001, Zm00001eb340670_P001
Poaceae	Zoysia japonica	6	nbis-gene-1804, nbis-gene-18903, nbis-gene-3483 ... nbis-gene-51026, nbis-gene-6466, nbis-gene-7753
Poaceae	Zoysia macrostachya	6	Zma_g10268, Zma_g1342, Zma_g16405, Zma_g21220, Zma_g3748 ... Zma_g7922
Portulacaceae	Portulaca oleracea	7	evm.TU.LG08.1481, evm.TU.LG18.1009, evm.TU.LG18.1536 ... evm.TU.LG19.351, evm.TU.LG20.344, evm.TU.LG20.865, evm.TU.LG22.373
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g13390, gene.Posoc05g22710
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_13_RagTag.464, evm.TU.Scaffold_1_RagTag.47 ... evm.TU.Scaffold_2_RagTag.1266, evm.TU.Scaffold_6_RagTag.1222
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-16202, nbisL1-mrna-2865, nbisL1-mrna-2930 ... nbisL1-mrna-30642, nbisL1-mrna-3913, nbisL1-mrna-3969, nbisL1-mrna-8235
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-13682, nbisL1-mrna-17305, nbisL1-mrna-3787 ... nbisL1-mrna-785
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-1053, nbisL1-mrna-18748, nbisL1-mrna-21033 ... nbisL1-mrna-5138
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000009l.464, evm.TU.utg000011l.785 ... evm.TU.utg000012l.31, evm.TU.utg000015l.241
Rhizophoraceae	Kandelia obovata	4	Maker00004980, Maker00008014, Maker00011349, Maker00015355
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-12368, nbisL1-mrna-13515, nbisL1-mrna-4162 ... nbisL1-mrna-7928
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-22152, nbisL1-mrna-24676, nbisL1-mrna-4024 ... nbisL1-mrna-41, nbisL1-mrna-5473
Salicaceae	Populus euphratica	7	populus_peu06122, populus_peu06856, populus_peu08582 ... populus_peu13201, populus_peu13258, populus_peu15588, populus_peu19984
Solanaceae	Lycium barbarum	4	gene-LOC132598468, gene-LOC132600549, gene-LOC132612822 ... gene-LOC132626756
Solanaceae	Solanum pennellii	4	gene-LOC107004475, gene-LOC107004811, gene-LOC107008289 ... gene-LOC107009180
Tamaricaceae	Reaumuria soongarica	4	STRG.28396_chr04_+, STRG.32467_chr09_-, gene_4670, gene_6462
Tamaricaceae	Tamarix chinensis	3	TC01G1400, TC02G1116, TC02G3563
Zosteraceae	Zostera marina	3	Zosma01g36990.v3.1, Zosma03g17910.v3.1, Zosma04g24430.v3.1