Basic Information
Locus ID:
BH09.856
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 16410975 | 16415428 | - | BH09.856 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 93,476.66 Da | 58.79 | 68.95 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 414 | 680 | 8.49878E-84 | - |
| Pfam | PF00069 | Protein kinase domain | 409 | 677 | 1.2E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 692 | 5.66E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 483 | 692 | 2.1E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 482 | 2.1E-31 | - |
| SMART | SM00220 | serkin_6 | 408 | 680 | 1.7E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 694 | 39.580158 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 526 | 538 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 414 | 436 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 852 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 785 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 722 | 789 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 170 | - | - |
| Coils | Coil | Coil | 431 | 458 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 4.12E-78 |
| RefSeq | XP_002447714.2 | cysteine-rich receptor-like protein kinase 25 [Sorghum bicolor] | 3.48E-206 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 1.09E-75 | |
| TrEMBL | A0A811QTD8 | Cysteine-rich receptor-like protein kinase 25 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS44533 PE=4 SV=1 | 3.67E-208 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH09.862, BH09.855, BH09.856, CH09.928 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G073300 |
| Poaceae | Zea mays | 2 | Zm00001eb421250_P001, Zm00001eb421270_P002 |