Basic Information
Locus ID:
BH09.855
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 16368056 | 16370563 | - | BH09.855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 33,376.21 Da | 49.71 | 93.46 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 34 | 221 | 4.0E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 266 | 6.52E-61 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 88 | 6.4E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 267 | 7.6E-48 | - |
| SMART | SM00220 | serkin_6 | 25 | 256 | 6.7E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 269 | 29.96904 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 126 | 138 | - | IPR008271 |
| Coils | Coil | Coil | 38 | 65 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23270.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 19. Encodes a cysteine-rich receptor-like protein kinase. | 5.76E-56 |
| RefSeq | XP_002447714.2 | cysteine-rich receptor-like protein kinase 25 [Sorghum bicolor] | 1.11E-135 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 5.65E-55 | |
| TrEMBL | A0A811R2N0 | Cysteine-rich receptor-like protein kinase 25 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS47247 PE=4 SV=1 | 2.72E-135 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH09.862, BH09.855, BH09.856, CH09.928 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G073300 |
| Poaceae | Zea mays | 2 | Zm00001eb421250_P001, Zm00001eb421270_P002 |