Basic Information
Locus ID:
BH09.845
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ABC transporter C family member 9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 16245228 | 16251451 | + | BH09.845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 166,396.20 Da | 43.87 | 99.56 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 915 | 1209 | 8.02578E-93 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1232 | 1452 | 3.78656E-122 | - |
| CDD | cd03250 | ABCC_MRP_domain1 | 600 | 799 | 1.52257E-107 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 310 | 574 | 3.12565E-71 | IPR044746 |
| Pfam | PF00664 | ABC transporter transmembrane region | 311 | 423 | 2.7E-8 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 426 | 553 | 2.7E-9 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 919 | 1161 | 5.9E-32 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 618 | 752 | 7.7E-18 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 1251 | 1399 | 4.0E-29 | IPR003439 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 299 | 580 | 7.59E-30 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 597 | 819 | 2.17E-55 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 915 | 1214 | 7.32E-53 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1226 | 1465 | 5.62E-66 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1217 | 1470 | 1.4E-81 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 596 | 827 | 6.3E-69 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 278 | 587 | 5.2E-42 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 878 | 1215 | 3.2E-60 | IPR036640 |
| SMART | SM00382 | AAA_5 | 627 | 800 | 2.3E-10 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1260 | 1452 | 1.5E-9 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 312 | 566 | 24.267569 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 917 | 1197 | 38.836098 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1236 | 1468 | 16.600111 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 600 | 823 | 21.608755 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 725 | 739 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 892 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 872 | 892 | - | - |
| Coils | Coil | Coil | 447 | 467 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_014661069.2 | putative ABC transporter C family member 15 [Setaria italica] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A368RT84 | ABC transporter C family member 15 OS=Setaria italica OX=4555 GN=SETIT_7G076800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology