Basic Information
Locus ID:
BH09.817
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 15867682 | 15876429 | + | BH09.817 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 172,014.02 Da | 44.09 | 95.95 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 792 | 812 | 1.7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 863 | 884 | 1.2 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 1021 | 1040 | 1.7 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 392 | 633 | 1.5E-37 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 30 | 309 | 1.0E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 910 | 932 | 0.045 | IPR001611 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 386 | 647 | 3.85E-52 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 764 | 1055 | 1.41E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 320 | 9.85E-66 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 985 | 1468 | 9.35E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1208 | 1382 | 2.1E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 123 | 334 | 1.6E-46 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 544 | 632 | 2.0E-8 | IPR042197 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 100 | 5.2E-22 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 633 | 727 | 1.4E-7 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 742 | 952 | 8.6E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 954 | 1178 | 2.3E-36 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 357 | 540 | 3.5E-28 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1388 | 1478 | 2.5E-13 | IPR032675 |
| SMART | SM00220 | serkin_6 | 30 | 312 | 8.7E-31 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 792 | 813 | 7.257614 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 30 | 323 | 36.739227 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 36 | 58 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 166 | 178 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 580 | 594 | 9.1E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1125 | 1141 | 9.1E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 411 | 426 | 9.1E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 482 | 496 | 9.1E-18 | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 4.03E-49 |
| RefSeq | XP_039819184.1 | disease resistance protein RGA2-like [Panicum virgatum] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 5.21E-53 | |
| TrEMBL | A0A8T0PX94 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG135100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology