Basic Information
Locus ID:
BH09.577
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
IBR domain, a half RING-finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 12238663 | 12239525 | + | BH09.577 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 26,735.16 Da | 57.43 | 70.43 | -0.08 |
Protein Domain:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974920.1 | probable E3 ubiquitin-protein ligase ARI5 [Setaria italica] | 2.53E-45 |
| TrEMBL | K3YL77 | RING-type domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G246700v2 PE=4 SV=1 | 8.57E-44 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0602s00007.v1.0 |
| Poaceae | Echinochloa crus-galli | 4 | BH08.2499, BH09.577, CH08.2686, CH08.2687 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_8BG0668950 |