halophFGD

Basic Information

Locus ID: BH09.48

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: protein disulfide oxidoreductase activity

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH09	1130036	1131196	+	BH09.48

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.05	43,784.84 Da	49.91	83.86	-0.21

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	12	55	2.4E-6	IPR001810
Pfam	PF03478	Protein of unknown function (DUF295)	300	357	1.4E-8	IPR005174
SUPERFAMILY	SSF81383	F-box domain	9	48	8.9E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	12	52	5.2E-6	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K07390 (monothiol glutaredoxin)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_025827500.1	uncharacterized protein LOC112902591 [Panicum hallii]	3.1E-182
TrEMBL	A0A8T0PM49	DUF295 domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8KG058400 PE=4 SV=1	1.48E-164

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	15	AH04.349, AH04.350, AH04.351, AH04.352, BH04.319, BH09.47 ... BH09.48, CH04.333, Contig1337.2, Contig1337.4, Contig1347.1, Contig1347.3, Contig1437.1, Contig1437.2, Contig1476.1
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_9AG0675010, gene-QOZ80_9AG0675020 ... gene-QOZ80_9BG0698860, gene-QOZ80_9BG0698880
Poaceae	Paspalum vaginatum	2	gene-BS78_05G094900, gene-BS78_K254200
Poaceae	Sporobolus alterniflorus	1	Chr07G021150
Poaceae	Triticum aestivum	1	TraesCS7D02G214100.1.cds1