Basic Information
Locus ID:
BH09.479
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 10008609 | 10011811 | + | BH09.479 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 38,616.60 Da | 80.44 | 73.27 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 40 | 133 | 8.2E-15 | IPR025886 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 276 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56240.1 | phloem protein 2-B13. | 9.28E-6 |
| RefSeq | XP_025798732.1 | F-box protein PP2-B1-like [Panicum hallii] | 4.05E-17 |
| TrEMBL | A0A2T7FDM2 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G432400 PE=4 SV=1 | 1.4E-17 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||