HalophFGD

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Basic Information
Locus ID: BH09.477
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Phloem protein 2
Maps and Mapping Data
Chromosome Start End Strand ID
BH09 9992991 9994037 - BH09.477
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.53 22,116.18 Da 49.21 61.48 -0.55
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14299 Phloem protein 2 40 133 2.3E-15 IPR025886
MobiDBLite mobidb-lite consensus disorder prediction 1 42 - -
MobiDBLite mobidb-lite consensus disorder prediction 188 210 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT1G56240.1 phloem protein 2-B13. 2.63E-6
RefSeq XP_025798732.1 F-box protein PP2-B1-like [Panicum hallii] 2.17E-18
TrEMBL A0A2T7FDM2 F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G432400 PE=4 SV=1 6.26E-19
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 28 AH02.1637, AH02.3407, AH04.1021, AH04.1940, AH06.1327 ...
AH06.1908, AH06.2307, AH08.1711, AH08.795, BH02.2325, BH04.1838, BH04.2023, BH04.2346, BH04.82, BH05.2507, BH05.3727, BH09.185, BH09.477, BH09.479, CH02.1733, CH03.4794, CH04.1028, CH04.1436, CH04.44, CH05.3459, CH06.1596, CH09.2360, CH09.521
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.