Basic Information
Locus ID:
BH09.43
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 1041263 | 1042164 | + | BH09.43 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.26 | 15,494.41 Da | 47.74 | 84.47 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 66 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A835BYP2 | zf-RVT domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_026724 PE=4 SV=1 | 2.72E-23 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH09.43, CH02.943 |
| Poaceae | Lolium multiflorum | 18 | gene-QYE76_000604, gene-QYE76_000934, gene-QYE76_008470 ... |
| Poaceae | Oryza coarctata | 1 | Oco13G011900 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g29350.1 |
| Poaceae | Paspalum vaginatum | 12 | gene-BS78_01G123800, gene-BS78_02G063400, gene-BS78_K225200 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0503714 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G029590, Chr06G006790, Chr07G015220, Chr25G003250 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G423000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1AG041210, gene_TRIDC6BG030410 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2B02G451200.1.cds1, TraesCS7B02G453300.1.cds1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-22972, nbis-gene-39044 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g15460 |