Basic Information
Locus ID:
BH09.2757
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 34053204 | 34054387 | + | BH09.2757 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 39,871.97 Da | 53.58 | 78.55 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03478 | Protein of unknown function (DUF295) | 270 | 323 | 5.8E-15 | IPR005174 |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 46 | 2.1E-7 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015613719.1 | uncharacterized protein LOC9268809 [Oryza sativa Japonica Group] | 8.59E-85 |
| TrEMBL | A0A1E5VX93 | DUF295 domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0009260 PE=4 SV=1 | 2.33E-125 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g28550 |
| Poaceae | Echinochloa crus-galli | 18 | AH01.1575, AH02.739, AH06.553, AH06.555, AH09.2525, BH06.600 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0114370, gene-QOZ80_6AG0511200 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0043520.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_001886 |
| Poaceae | Oryza coarctata | 2 | Oco19G007770, Oco20G008080 |
| Poaceae | Oryza sativa | 3 | LOC_Os05g05760.1, LOC_Os10g37450.1, LOC_Os10g37600.1 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_06G098400, gene-BS78_06G219600 ... |
| Poaceae | Puccinellia tenuiflora | 7 | Pt_Chr0300069, Pt_Chr0300424, Pt_Chr0300451, Pt_Chr0307103 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G021640 |
| Poaceae | Thinopyrum elongatum | 4 | Tel1E01G311900, Tel1E01G312200, Tel5E01G452900 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG026620, gene_TRIDC5BG046510 |
| Poaceae | Triticum aestivum | 11 | TraesCS1A02G174100.1.cds1, TraesCS1B02G190200.1.cds1 ... |