Basic Information
Locus ID:
BH09.2650
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 33209601 | 33213797 | + | BH09.2650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 76,967.58 Da | 46.94 | 85.73 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 85 | 177 | 3.9E-8 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 275 | 549 | 6.0E-90 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 77 | 193 | 3.22E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 77 | 210 | 1.5E-14 | IPR011333 |
| SMART | SM00225 | BTB_4 | 86 | 197 | 3.3E-9 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 275 | 573 | 90.799561 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 86 | 161 | 12.887932 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 627 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 707 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 7.67E-200 |
| RefSeq | XP_025825444.1 | BTB/POZ domain-containing protein At5g03250-like [Panicum hallii] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 7.38E-199 | |
| TrEMBL | A0A2S3IAR2 | BTB/POZ domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_7G307000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology