Basic Information
Locus ID:
BH09.239
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Domain of unknown function (DUF4220)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 4836047 | 4849380 | - | BH09.239 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 258,155.77 Da | 49.84 | 83.61 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 1024 | 1153 | 3.19189E-31 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 1300 | 1390 | 2.88891E-22 | - |
| Pfam | PF08276 | PAN-like domain | 1312 | 1371 | 6.4E-12 | IPR003609 |
| Pfam | PF04578 | Protein of unknown function, DUF594 | 668 | 705 | 1.1E-8 | IPR007658 |
| Pfam | PF13968 | Domain of unknown function (DUF4220) | 48 | 430 | 4.4E-89 | IPR025315 |
| Pfam | PF01453 | D-mannose binding lectin | 1071 | 1169 | 4.4E-30 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 1172 | 1281 | 2.8E-18 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 1498 | 1626 | 5.6E-12 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 1072 | 1175 | 1.11E-25 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1450 | 1643 | 1.32E-26 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1438 | 1499 | 8.3E-7 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 1010 | 1151 | 2.5E-20 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1500 | 1635 | 4.7E-19 | - |
| SMART | SM00108 | blect_4 | 1021 | 1153 | 2.1E-30 | IPR001480 |
| SMART | SM00220 | serkin_6 | 1405 | 1628 | 0.0012 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 1303 | 1390 | 8.822384 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1015 | 1149 | 17.26156 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1182 | 1632 | 9.093122 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1468 | 1490 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 880 | 900 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2030 | 2066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1973 | 2067 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 733 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 760 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1980 | 1994 | - | - |
| Coils | Coil | Coil | 2138 | 2169 | - | - |
| Coils | Coil | Coil | 2176 | 2210 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 7.24E-109 |
| RefSeq | XP_025825098.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Panicum hallii] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 7.02E-108 | |
| TrEMBL | A0A2S3I506 | Receptor-like serine/threonine-protein kinase OS=Panicum hallii OX=206008 GN=PAHAL_7G024600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||