Basic Information
Locus ID:
BH09.200
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
BEST Arabidopsis thaliana protein match is F-box and associated interaction domains-containing protein (TAIR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 4147702 | 4149036 | + | BH09.200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 50,833.45 Da | 45.69 | 75.77 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 54 | 1.1E-9 | IPR001810 |
| Pfam | PF07734 | F-box associated | 220 | 341 | 5.7E-8 | IPR006527 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 82 | 1.31E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 17 | 54 | 1.4E-7 | - |
| SMART | SM00256 | fbox_2 | 18 | 58 | 4.2E-9 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 125 | 314 | 1.7E-25 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 12 | 58 | 10.186324 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11620.1 | F-box and associated interaction domains-containing protein. | 1.79E-18 |
| RefSeq | XP_034603389.1 | F-box protein At1g11270-like [Setaria viridis] | 3.41E-107 |
| Q9SAB5 | Putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Arabidopsis thaliana OX=3702 GN=At1g11620 PE=4 SV=1 | 1.76E-17 | |
| TrEMBL | A0A1E5V2X1 | F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0019467 PE=4 SV=1 | 5.25E-188 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology