Basic Information
Locus ID:
BH09.193
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
GBF1
Description:
Disordered region downstream of MFMR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 4012250 | 4015998 | + | BH09.193 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 52,042.23 Da | 79.28 | 53.31 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 495 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004955801.1 | DNA-binding protein EMBP-1 [Setaria italica] | 1.83E-10 |
| TrEMBL | A0A368PYJ7 | BZIP domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G081300v2 PE=4 SV=1 | 2.82E-9 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH02.1987, BH01.3734, BH09.193, CH01.3899 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0556640.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_020230, gene-QYE76_020231 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G324300 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G136000.1.cds1 |