Basic Information
Locus ID:
BH09.1729
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK24
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 24893385 | 24894657 | + | BH09.1729 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.62 | 34,790.74 Da | 69.44 | 58.86 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 237 | 318 | 1.4E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 139 | 317 | 5.8E-30 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 232 | 318 | 2.5E-24 | - |
| SMART | SM00220 | serkin_6 | 156 | 323 | 1.1E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 110 | 324 | 15.184876 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 243 | 255 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 114 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.3 | - | 9.87E-41 |
| RefSeq | XP_022683519.1 | LOW QUALITY PROTEIN: calcium-dependent protein kinase 21-like [Setaria italica] | 2.91E-81 |
| Q6ZIU9 | Calcium-dependent protein kinase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK21 PE=2 SV=1 | 8.77E-54 | |
| TrEMBL | A0A4U6U8M3 | Calcium-dependent protein kinase 30 OS=Setaria viridis OX=4556 GN=SEVIR_6G237000v2 PE=4 SV=1 | 1.16E-79 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for BH09.1729.