Basic Information
Locus ID:
BH09.1160
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 20184160 | 20186614 | - | BH09.1160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 43,094.60 Da | 37.52 | 99.59 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 55 | 4.2E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 164 | 328 | 6.87E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 71 | 2.49E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 16 | 69 | 3.0E-7 | - |
| SMART | SM00256 | fbox_2 | 22 | 61 | 2.1E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 66 | 9.603447 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56420.1 | F-box/RNI-like/FBD-like domains-containing protein. | 9.64E-13 |
| RefSeq | XP_039771955.1 | MEIOTIC F-BOX protein MOF-like [Panicum virgatum] | 5.15E-78 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 1.71E-17 | |
| TrEMBL | A0A8T0QI95 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7KG166800 PE=4 SV=1 | 3.89E-94 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology