Basic Information
Locus ID:
BH09.1154
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 20093181 | 20096775 | - | BH09.1154 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 53,239.16 Da | 54.51 | 100.58 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 100 | 138 | 7.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 97 | 149 | 2.62E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 205 | 418 | 2.9E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 154 | 465 | 4.1E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 80 | 140 | 2.1E-7 | - |
| SMART | SM00256 | fbox_2 | 103 | 143 | 3.8E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 97 | 133 | 10.133335 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78760.1 | F-box/RNI-like superfamily protein. | 3.04E-16 |
| RefSeq | XP_022683200.1 | F-box/FBD/LRR-repeat protein At5g22700 isoform X2 [Setaria italica] | 6.02E-95 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 5.86E-33 | |
| TrEMBL | A0A368RP38 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G219100v2 PE=4 SV=1 | 1.36E-93 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology