Basic Information
Locus ID:
BH09.1153
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 20085474 | 20087879 | - | BH09.1153 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 51,219.73 Da | 49.03 | 98.99 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 70 | 3.01E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 146 | 389 | 9.42E-15 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 58 | 7.2E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 114 | 431 | 4.5E-13 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78760.1 | F-box/RNI-like superfamily protein. | 8.44E-12 |
| RefSeq | XP_039819407.1 | MEIOTIC F-BOX protein MOF-like isoform X1 [Panicum virgatum] | 1.31E-143 |
| Q9ZV94 | Putative F-box/FBD/LRR-repeat protein At1g78760 OS=Arabidopsis thaliana OX=3702 GN=At1g78760 PE=4 SV=1 | 8.37E-11 | |
| TrEMBL | A0A8T0PVA4 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG128000 PE=4 SV=1 | 2.97E-142 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology