Basic Information
Locus ID:
BH09.1097
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH09 | 19462496 | 19472789 | + | BH09.1097 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 170,074.06 Da | 50.64 | 71.04 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 32 | 178 | 6.30475E-42 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 485 | 729 | 3.1E-23 | IPR001245 |
| Pfam | PF04564 | U-box domain | 749 | 784 | 8.2E-7 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 746 | 785 | 6.98E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 454 | 741 | 7.24E-45 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 43 | 147 | 6.49E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 744 | 796 | 1.4E-14 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 446 | 545 | 2.0E-19 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 33 | 153 | 5.6E-5 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 546 | 742 | 7.4E-32 | - |
| SMART | SM00504 | Ubox_2 | 751 | 813 | 0.0022 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 742 | 21.98333 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 747 | 781 | 10.563532 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1130 | 1171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1063 | 1077 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 816 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 956 | 1003 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 1187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1092 | 1129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1042 | 1062 | - | - |
| Coils | Coil | Coil | 360 | 380 | - | - |
| Coils | Coil | Coil | 398 | 418 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 1.47E-107 |
| RefSeq | XP_025824099.1 | U-box domain-containing protein 33-like [Panicum hallii] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 1.43E-106 | |
| TrEMBL | A0A2T7CV06 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G142800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg20599, jg21669, jg38472, jg38474 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7179 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah008994, Ah021957 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g089740 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg18409, Sbi_jg36814 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg4727 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017388 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl23501, Sgl28632 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000009838, gene:ENSEOMG00000029166 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2BG0001740, CQ.Regalona.r1.4BG0025330 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30150950 |
| Apiaceae | Apium graveolens | 1 | Ag2G01342 |
| Arecaceae | Cocos nucifera | 2 | COCNU_15G002120, scaffold011427G000010 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103696508, gene-LOC103701265, gene-LOC120112825 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.361.V1.1, AsparagusV1_04.362.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G25316 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G26450.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10024531m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g24360.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g082460.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1577 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1740 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno13g02770 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g17120 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.2101 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00004326, Pov_00038032 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G30466 |
| Poaceae | Echinochloa crus-galli | 6 | AH09.1019, AH09.1023, BH09.1093, BH09.1097, CH09.1228 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0133470, gene-QOZ80_2BG0189030 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0168590.1 |
| Poaceae | Oryza coarctata | 4 | Oco03G012180, Oco04G014130, Oco07G005980, Oco08G005970 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g34500.1, LOC_Os04g35170.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G158100, gene-BS78_06G096500 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0302678, Pt_Chr0302717, Pt_Chr0705374 |
| Poaceae | Sporobolus alterniflorus | 8 | Chr06G010150, Chr09G014650, Chr13G010670, Chr15G011630 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G535200, Tel6E01G383300 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG043980, gene_TRIDC2BG046690 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G303300.1, TraesCS2B02G319800.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb082760_P001, Zm00001eb181860_P002 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-18845, nbis-gene-37851, nbis-gene-55342 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g16450, Zma_g19704 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.549, evm.TU.LG09.2123 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g05610 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.7 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19747 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4041 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-22388 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000028l.4 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00010793 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7959 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22540 |
| Salicaceae | Populus euphratica | 3 | populus_peu00008, populus_peu17083, populus_peu17084 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132627636, gene-LOC132636272 |
| Solanaceae | Solanum chilense | 2 | SOLCI004462500, SOLCI007038000 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107002250, gene-LOC107007646 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_12072, gene_16947 |
| Tamaricaceae | Tamarix chinensis | 2 | TC06G0611, TC06G0612 |
| Zosteraceae | Zostera marina | 1 | Zosma05g19610.v3.1 |