Basic Information
Locus ID:
BH08.779
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Speckle-type POZ protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 9344981 | 9354001 | - | BH08.779 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.75 | 93,080.66 Da | 56.78 | 74.99 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 265 | 396 | 5.12623E-18 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 423 | 498 | 4.8E-15 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 262 | 401 | 1.8E-19 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 415 | 565 | 2.55E-20 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 264 | 399 | 2.0E-16 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 403 | 565 | 2.0E-30 | IPR011333 |
| SMART | SM00225 | BTB_4 | 432 | 567 | 3.2E-12 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 264 | 395 | 10.393268 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 432 | 496 | 14.273625 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 757 | 771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 710 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 730 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 163 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 1.23E-43 |
| RefSeq | XP_004974328.1 | BTB/POZ and MATH domain-containing protein 2 [Setaria italica] | 8.58E-101 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 3.78E-42 | |
| TrEMBL | K3YN23 | BTB domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G020000v2 PE=4 SV=1 | 9.55E-100 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||