Basic Information
Locus ID:
BH08.747
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 8792323 | 8796606 | + | BH08.747 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.88 | 61,882.92 Da | 73.87 | 70.28 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 31 | 147 | 3.76634E-17 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 205 | 265 | 2.2E-6 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 178 | 265 | 1.45E-10 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 29 | 151 | 4.58E-22 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 29 | 150 | 8.5E-18 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 161 | 295 | 6.5E-22 | IPR011333 |
| SMART | SM00225 | BTB_4 | 180 | 266 | 4.7E-6 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 147 | 15.941849 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 582 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 4.91E-32 |
| RefSeq | XP_044325208.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum aestivum] | 9.0E-59 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 4.8E-31 | |
| TrEMBL | A0A5J9W5R5 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09100 PE=4 SV=1 | 3.64E-64 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH08.700, BH08.747, CH08.832, CH09.1648 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0622370, gene-QOZ80_8BG0650660 |