Basic Information
Locus ID:
BH08.738
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 8216967 | 8217332 | - | BH08.738 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 10,347.48 Da | 42.28 | 46.56 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 32 | 69 | 4.07154E-6 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 79 | 7.85E-10 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 30 | 87 | 4.1E-5 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 28 | 90 | 8.833528 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 1.67E-9 |
| RefSeq | XP_025822113.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum hallii] | 2.29E-19 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 1.66E-8 | |
| TrEMBL | A0A2S3I182 | BTB domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_6G074300 PE=4 SV=1 | 5.18E-18 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH05.1237, AH06.2058, AH08.728, AH08.759, BH08.738 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000485, gene-QYE76_000491 |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G606100, Tel7E01G877400 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-51292 |