HalophFGD

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Basic Information
Locus ID: BH08.71
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
BH08 657678 661419 - BH08.71
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.64 81,017.60 Da 51.90 99.89 0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00083 Sugar (and other) transporter 1 271 6.8E-52 IPR005828
SUPERFAMILY SSF103473 MFS general substrate transporter 1 269 3.14E-27 IPR036259
SUPERFAMILY SSF81383 F-box domain 347 397 9.81E-7 IPR036047
SUPERFAMILY SSF52047 RNI-like 475 714 5.18E-12 -
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains 1 274 1.6E-67 IPR036259
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 414 725 1.2E-12 IPR032675
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. 1 260 16.120277 IPR020846
PRINTS PR00171 Sugar transporter signature 172 193 8.3E-6 IPR003663
PRINTS PR00171 Sugar transporter signature 195 207 8.3E-6 IPR003663
Gene Ontology
Biological Process:
GO:0055085 (transmembrane transport)
Molecular Function:
GO:0005515 (protein binding) GO:0022857 (transmembrane transporter activity)
Cellular Component:
GO:0016020 (membrane)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G36670.1 Major facilitator superfamily protein. 3.6E-81
RefSeq XP_052152466.1 putative F-box/FBD/LRR-repeat protein At5g56810 isoform X2 [Oryza glaberrima] 5.91E-205
Swiss-Prot Q8GXR2 Probable polyol transporter 6 OS=Arabidopsis thaliana OX=3702 GN=PLT6 PE=2 SV=2 3.48E-80
TrEMBL A0A0E0PAK7 FBD domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 2.86E-202
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_22601
Amaranthaceae Suaeda glauca 2 Sgl45688, Sgl50449
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.7AG0013500, CQ.Regalona.r1.7AG0013530
Poaceae Echinochloa crus-galli 65 AH01.38, AH01.4289, AH02.401, AH03.1915, AH04.1452, AH04.55 ...
AH04.56, AH07.3327, AH08.109, AH08.69, AH09.1793, AH09.2012, AH09.2511, AH09.2518, BH01.1066, BH02.2221, BH02.424, BH04.1361, BH04.1476, BH04.63, BH05.14, BH06.103, BH06.2604, BH07.1521, BH07.2954, BH07.3191, BH07.914, BH08.155, BH08.20, BH08.30, BH08.33, BH08.71, BH08.72, BH08.74, BH09.2171, BH09.2736, BH09.2742, BH09.685, CH01.5269, CH01.576, CH02.2379, CH02.467, CH03.2831, CH03.2832, CH04.160, CH04.1679, CH04.1688, CH05.34, CH06.2910, CH07.1327, CH07.2527, CH07.2645, CH07.3529, CH07.667, CH07.668, CH08.119, CH08.165, CH08.176, CH08.195, CH09.2316, CH09.2930, CH09.2933, CH09.2934, CH09.3107, Contig181.114
Poaceae Eleusine coracana subsp. coracana 40 gene-QOZ80_1AG0022220, gene-QOZ80_1AG0022280 ...
gene-QOZ80_1BG0060600, gene-QOZ80_2AG0105700, gene-QOZ80_2AG0145100, gene-QOZ80_2AG0145190, gene-QOZ80_2BG0159110, gene-QOZ80_2BG0197190, gene-QOZ80_2BG0200780, gene-QOZ80_5AG0380260, gene-QOZ80_5AG0403960, gene-QOZ80_5BG0417470, gene-QOZ80_5BG0426040, gene-QOZ80_5BG0427350, gene-QOZ80_5BG0452360, gene-QOZ80_6AG0507530, gene-QOZ80_6AG0540390, gene-QOZ80_6AG0548650, gene-QOZ80_6AG0549180, gene-QOZ80_6BG0458730, gene-QOZ80_6BG0493700, gene-QOZ80_6BG0502300, gene-QOZ80_6BG0502730, gene-QOZ80_7AG0553880, gene-QOZ80_7BG0584870, gene-QOZ80_7BG0584910, gene-QOZ80_8AG0615090, gene-QOZ80_8AG0615160, gene-QOZ80_8AG0615210, gene-QOZ80_8AG0615340, gene-QOZ80_8AG0615360, gene-QOZ80_8AG0615370, gene-QOZ80_8AG0615540, gene-QOZ80_8BG0642300, gene-QOZ80_8BG0642560, gene-QOZ80_8BG0642620, gene-QOZ80_8BG0642850, gene-QOZ80_8BG0643020, gene-QOZ80_8BG0645870, gene-QOZ80_8BG0662250
Poaceae Hordeum vulgare 27 HORVU.MOREX.r3.1HG0062550.1, HORVU.MOREX.r3.1HG0085090.1 ...
HORVU.MOREX.r3.2HG0123760.1.CDS1, HORVU.MOREX.r3.2HG0210090.1, HORVU.MOREX.r3.2HG0210110.1, HORVU.MOREX.r3.3HG0319680.1, HORVU.MOREX.r3.4HG0337270.1, HORVU.MOREX.r3.4HG0412290.1, HORVU.MOREX.r3.5HG0442850.1, HORVU.MOREX.r3.5HG0442960.1, HORVU.MOREX.r3.5HG0462370.1, HORVU.MOREX.r3.5HG0477170.1, HORVU.MOREX.r3.5HG0484800.1, HORVU.MOREX.r3.5HG0491690.1, HORVU.MOREX.r3.5HG0492130.1, HORVU.MOREX.r3.5HG0492430.1, HORVU.MOREX.r3.5HG0493210.1, HORVU.MOREX.r3.5HG0493280.1, HORVU.MOREX.r3.5HG0493290.1, HORVU.MOREX.r3.5HG0493300.1.CDS1, HORVU.MOREX.r3.5HG0493780.1, HORVU.MOREX.r3.5HG0494110.1, HORVU.MOREX.r3.5HG0494340.1, HORVU.MOREX.r3.5HG0494350.1, HORVU.MOREX.r3.5HG0494710.1, HORVU.MOREX.r3.5HG0496700.1, HORVU.MOREX.r3.6HG0546140.1
Poaceae Lolium multiflorum 32 gene-QYE76_001586, gene-QYE76_003671, gene-QYE76_005960 ...
gene-QYE76_005983, gene-QYE76_006176, gene-QYE76_006286, gene-QYE76_006410, gene-QYE76_006441, gene-QYE76_006448, gene-QYE76_006522, gene-QYE76_006541, gene-QYE76_006542, gene-QYE76_006553, gene-QYE76_006575, gene-QYE76_006578, gene-QYE76_006592, gene-QYE76_006604, gene-QYE76_007116, gene-QYE76_015188, gene-QYE76_015190, gene-QYE76_016784, gene-QYE76_024659, gene-QYE76_037183, gene-QYE76_037393, gene-QYE76_039003, gene-QYE76_039005, gene-QYE76_039092, gene-QYE76_039474, gene-QYE76_047572, gene-QYE76_050868, gene-QYE76_055513, gene-QYE76_062155
Poaceae Oryza coarctata 29 Oco02G022210, Oco03G000340, Oco04G000340, Oco04G021260 ...
Oco06G012350, Oco07G009060, Oco07G016510, Oco08G009050, Oco08G015950, Oco08G015960, Oco09G015050, Oco09G017490, Oco09G017960, Oco10G017340, Oco14G012070, Oco17G008530, Oco17G008540, Oco17G008670, Oco17G008700, Oco17G009090, Oco18G008770, Oco18G008790, Oco18G008940, Oco21G006460, Oco21G006510, Oco21G006570, Oco22G007590, Oco22G007650, Oco22G007710
Poaceae Oryza sativa 38 LOC_Os01g40180.1, LOC_Os01g56730.1, LOC_Os02g01530.1 ...
LOC_Os02g01550.1, LOC_Os03g10540.1, LOC_Os03g11790.1, LOC_Os03g11874.1, LOC_Os03g42730.1, LOC_Os04g40330.1, LOC_Os04g40370.1, LOC_Os04g53510.1, LOC_Os04g53520.1, LOC_Os05g45520.1, LOC_Os05g45570.1, LOC_Os05g45870.1, LOC_Os05g45875.1, LOC_Os05g46090.1, LOC_Os05g49680.1, LOC_Os05g49980.1, LOC_Os06g04690.1, LOC_Os06g04710.1, LOC_Os06g04980.1, LOC_Os08g43840.1, LOC_Os09g15590.1, LOC_Os09g32410.1, LOC_Os09g32580.1, LOC_Os09g32600.1, LOC_Os09g32610.1, LOC_Os09g32660.1, LOC_Os09g32860.1, LOC_Os09g32870.1, LOC_Os09g32910.1, LOC_Os09g33620.1, LOC_Os10g38890.1, LOC_Os11g32360.1, LOC_Os11g32410.1, LOC_Os11g32810.1, LOC_Os11g32940.1
Poaceae Paspalum vaginatum 34 gene-BS78_02G032100, gene-BS78_02G145400, gene-BS78_K112200 ...
gene-BS78_02G169400, gene-BS78_02G171400, gene-BS78_02G177500, gene-BS78_02G217600, gene-BS78_03G336200, gene-BS78_04G261500, gene-BS78_06G254700, gene-BS78_06G259600, gene-BS78_06G261000, gene-BS78_06G261400, gene-BS78_06G261500, gene-BS78_06G261600, gene-BS78_07G010700, gene-BS78_07G016600, gene-BS78_07G016900, gene-BS78_07G018100, gene-BS78_07G018300, gene-BS78_07G018500, gene-BS78_07G018600, gene-BS78_09G201200, gene-BS78_09G201300, gene-BS78_09G239200, gene-BS78_09G258700, gene-BS78_09G258800, gene-BS78_10G011800, gene-BS78_10G013200, gene-BS78_10G050000, gene-BS78_10G069700, gene-BS78_10G252600, gene-BS78_K237800, gene-BS78_K237900
Poaceae Puccinellia tenuiflora 39 Pt_Chr0103602, Pt_Chr0105780, Pt_Chr0105781, Pt_Chr0200146 ...
Pt_Chr0200998, Pt_Chr0205033, Pt_Chr0300118, Pt_Chr0303132, Pt_Chr0303183, Pt_Chr0305132, Pt_Chr0305151, Pt_Chr0501152, Pt_Chr0503623, Pt_Chr0604550, Pt_Chr0700041, Pt_Chr0700928, Pt_Chr0700929, Pt_Chr0701013, Pt_Chr0701363, Pt_Chr0701367, Pt_Chr0701368, Pt_Chr0701400, Pt_Chr0701407, Pt_Chr0701408, Pt_Chr0701425, Pt_Chr0701429, Pt_Chr0701438, Pt_Chr0701442, Pt_Chr0701478, Pt_Chr0701486, Pt_Chr0701489, Pt_Chr0701528, Pt_Chr0701632, Pt_Chr0701712, Pt_Chr0701727, Pt_Chr0701758, Pt_Chr0702731, Pt_Chr0705350, Pt_Chr0705360
Poaceae Sporobolus alterniflorus 14 Chr02G005670, Chr05G027700, Chr06G003150, Chr07G010790 ...
Chr0G006460, Chr12G018720, Chr14G000560, Chr15G004560, Chr16G006340, Chr16G018370, Chr17G005730, Chr17G007820, Chr17G017550, Chr19G003990
Poaceae Thinopyrum elongatum 44 Tel1E01G109600, Tel1E01G109900, Tel1E01G110200 ...
Tel1E01G618800, Tel1E01G619200, Tel1E01G619500, Tel1E01G623500, Tel1E01G623600, Tel1E01G624000, Tel2E01G271500, Tel2E01G312600, Tel2E01G956100, Tel2E01G992100, Tel3E01G201400, Tel3E01G497800, Tel3E01G498100, Tel3E01G582200, Tel3E01G771100, Tel3E01G847500, Tel4E01G566600, Tel5E01G170400, Tel5E01G417400, Tel5E01G434700, Tel5E01G435000, Tel5E01G435100, Tel5E01G437900, Tel5E01G441000, Tel5E01G441500, Tel5E01G441900, Tel5E01G442000, Tel5E01G447800, Tel5E01G447900, Tel5E01G448000, Tel5E01G448100, Tel5E01G448400, Tel5E01G451600, Tel5E01G456400, Tel5E01G460300, Tel5E01G460600, Tel5E01G464800, Tel5E01G488300, Tel6E01G119400, Tel6E01G122800, Tel6E01G123400
Poaceae Triticum dicoccoides 38 gene_TRIDC1AG006870, gene_TRIDC1AG055890 ...
gene_TRIDC1AG056130, gene_TRIDC1BG008750, gene_TRIDC2BG019450, gene_TRIDC3AG014620, gene_TRIDC3AG052590, gene_TRIDC3BG019240, gene_TRIDC3BG058990, gene_TRIDC4BG052300, gene_TRIDC5AG013130, gene_TRIDC5AG041130, gene_TRIDC5AG041450, gene_TRIDC5AG042250, gene_TRIDC5AG042290, gene_TRIDC5AG042920, gene_TRIDC5AG042930, gene_TRIDC5AG043090, gene_TRIDC5AG043930, gene_TRIDC5AG044870, gene_TRIDC5AG073290, gene_TRIDC5AG073320, gene_TRIDC5BG007030, gene_TRIDC5BG041570, gene_TRIDC5BG043210, gene_TRIDC5BG044810, gene_TRIDC5BG044840, gene_TRIDC5BG045280, gene_TRIDC5BG045310, gene_TRIDC5BG045460, gene_TRIDC5BG046110, gene_TRIDC5BG046780, gene_TRIDC5BG046990, gene_TRIDC5BG047130, gene_TRIDC5BG047890, gene_TRIDC5BG049200, gene_TRIDC6AG005780, gene_TRIDC6BG008220
Poaceae Triticum aestivum 137 TraesCS1A02G051000.1, TraesCS1A02G114300.1 ...
TraesCS1A02G246100.1, TraesCS1A02G379500.1, TraesCS1A02G382000.1, TraesCS1B02G067400.1, TraesCS1B02G067700.1, TraesCS1B02G067800.1, TraesCS1B02G184400.1, TraesCS1B02G356000.1, TraesCS1B02G401200.1, TraesCS1B02G406900.1, TraesCS1D02G053100.1, TraesCS1D02G172900.1, TraesCS1D02G345000.1, TraesCS1D02G386600.1, TraesCS1D02G386700.2, TraesCS1D02G389700.1, TraesCS2A02G487600.1, TraesCS2A02G554600.1, TraesCS2B02G153700.1, TraesCS2B02G439600.1, TraesCS2B02G514900.1, TraesCS2B02G570700.1, TraesCS2B02G589300.1, TraesCS2B02G589400.1, TraesCS2D02G559800.1, TraesCS2D02G592200.1, TraesCS2D02G592300.1, TraesCS3A02G117900.1, TraesCS3A02G296800.1, TraesCS3A02G364700.1, TraesCS3A02G364900.1, TraesCS3B02G137200.3, TraesCS3B02G396800.1, TraesCS3B02G524200.1, TraesCS3D02G119700.1, TraesCS3D02G305900.1, TraesCS3D02G358100.2, TraesCS3D02G474400.1, TraesCS4B02G060700.1, TraesCS4B02G306800.1, TraesCS4B02G345300.1, TraesCS4D02G304800.1, TraesCS4D02G340300.1, TraesCS5A02G085700.1, TraesCS5A02G260800.1, TraesCS5A02G264100.2, TraesCS5A02G266300.1, TraesCS5A02G271900.1, TraesCS5A02G272000.1, TraesCS5A02G272100.1, TraesCS5A02G274900.1, TraesCS5A02G275200.1, TraesCS5A02G275400.1, TraesCS5A02G275500.1, TraesCS5A02G276900.1, TraesCS5A02G277000.1, TraesCS5A02G281000.1, TraesCS5A02G281300.1, TraesCS5A02G281400.1, TraesCS5A02G281500.1, TraesCS5A02G286300.2, TraesCS5A02G286400.1, TraesCS5A02G293200.1, TraesCS5A02G299900.1, TraesCS5A02G303600.1, TraesCS5A02G303700.1, TraesCS5A02G514200.1, TraesCS5A02G514300.1, TraesCS5B02G042500.1, TraesCS5B02G259200.1, TraesCS5B02G260500.1, TraesCS5B02G263500.1, TraesCS5B02G263900.1, TraesCS5B02G272200.1, TraesCS5B02G272400.1, TraesCS5B02G272500.1, TraesCS5B02G274100.2, TraesCS5B02G274700.1, TraesCS5B02G275000.1, TraesCS5B02G276700.1, TraesCS5B02G276800.1, TraesCS5B02G280300.1, TraesCS5B02G280400.1, TraesCS5B02G280500.2, TraesCS5B02G280600.1, TraesCS5B02G285600.1, TraesCS5B02G285700.1, TraesCS5B02G286800.1, TraesCS5B02G287000.1, TraesCS5B02G287800.1, TraesCS5B02G291300.1, TraesCS5B02G292300.1, TraesCS5B02G304000.2, TraesCS5D02G048200.1, TraesCS5D02G268300.1, TraesCS5D02G269700.1, TraesCS5D02G271700.1, TraesCS5D02G272200.1, TraesCS5D02G279500.2, TraesCS5D02G279600.1, TraesCS5D02G279700.1.cds1, TraesCS5D02G279800.1, TraesCS5D02G280200.1, TraesCS5D02G280300.1, TraesCS5D02G282800.1, TraesCS5D02G282900.1, TraesCS5D02G284300.1, TraesCS5D02G284400.1, TraesCS5D02G287400.1, TraesCS5D02G287500.1, TraesCS5D02G287900.1, TraesCS5D02G288200.1, TraesCS5D02G288300.1, TraesCS5D02G288400.1, TraesCS5D02G288500.1, TraesCS5D02G288600.1, TraesCS5D02G293900.1, TraesCS5D02G294000.1, TraesCS5D02G295200.1, TraesCS5D02G295400.1, TraesCS5D02G298100.1, TraesCS5D02G300400.1, TraesCS5D02G310300.1, TraesCS6A02G046000.1, TraesCS6A02G046200.1, TraesCS6A02G048500.1, TraesCS6B02G062100.1, TraesCS6B02G062200.2, TraesCS6B02G065100.1, TraesCS6D02G053200.1, TraesCS6D02G053300.1, TraesCS7B02G082200.1, TraesCS7D02G266900.1, TraesCSU02G107500.1, TraesCSU02G236400.1.cds1
Poaceae Zea mays 3 Zm00001eb143720_P003, Zm00001eb143790_P005 ...
Zm00001eb276920_P001
Poaceae Zoysia japonica 5 nbis-gene-45661, nbis-gene-51908, nbis-gene-52926 ...
nbis-gene-58533, nbis-gene-59015
Poaceae Zoysia macrostachya 3 Zma_g17528, Zma_g17529, Zma_g18906
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