Basic Information
Locus ID:
BH08.639
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 6954802 | 6962128 | - | BH08.639 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 123,382.56 Da | 47.49 | 78.00 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 47 | 81 | 4.8E-6 | IPR001810 |
| Pfam | PF00646 | F-box domain | 574 | 609 | 0.0029 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 173 | 1010 | 5.26E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 563 | 617 | 6.28E-10 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 45 | 87 | 3.27E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 570 | 628 | 1.9E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 120 | 233 | 2.0E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 40 | 96 | 1.4E-5 | - |
| SMART | SM00256 | fbox_2 | 577 | 616 | 0.11 | IPR001810 |
| SMART | SM00256 | fbox_2 | 50 | 89 | 0.015 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 44 | 80 | 9.02057 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 571 | 607 | 9.338503 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 824 | 849 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 802 | 823 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 572 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 872 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 534 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38390.1 | F-box/RNI-like superfamily protein. | 1.59E-8 |
| RefSeq | XP_034599059.1 | uncharacterized protein LOC117859964 isoform X1 [Setaria viridis] | 1.29E-240 |
| Q9FF23 | Putative F-box protein At5g38390 OS=Arabidopsis thaliana OX=3702 GN=At5g38390 PE=4 SV=1 | 1.58E-7 | |
| TrEMBL | A0A5J9SBV9 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_58050 PE=4 SV=1 | 1.1200000014615E-315 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology