Basic Information
Locus ID:
BH08.625
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 6592828 | 6593953 | - | BH08.625 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 33,420.21 Da | 59.98 | 84.86 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 31 | 76 | 1.1E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 123 | 279 | 7.06E-12 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 30 | 91 | 4.06E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 30 | 73 | 3.2E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 110 | 291 | 1.4E-16 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 28 | 76 | 8.59666 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039855364.1 | putative F-box/LRR-repeat protein 9 [Panicum virgatum] | 9.69E-114 |
| TrEMBL | A0A835KT02 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_005076 PE=4 SV=1 | 1.42E-127 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||