Basic Information
Locus ID:
BH08.605
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 6342407 | 6343535 | + | BH08.605 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 30,464.53 Da | 64.95 | 85.88 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 18 | 63 | 9.4E-9 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 72 | 1.96E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 127 | 240 | 1.45E-9 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 17 | 60 | 1.1E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 114 | 259 | 1.6E-11 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 63 | 8.676143 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 109 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039855364.1 | putative F-box/LRR-repeat protein 9 [Panicum virgatum] | 8.91E-54 |
| TrEMBL | A0A835KT02 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_005076 PE=4 SV=1 | 4.37E-65 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||