Basic Information
Locus ID:
BH08.539
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
hsp90
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 5560526 | 5563393 | - | BH08.539 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 26,219.38 Da | 39.76 | 91.39 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 15 | 172 | 1.41857E-89 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 28 | 170 | 1.9E-11 | IPR003594 |
| Pfam | PF00240 | Ubiquitin family | 176 | 237 | 1.1E-21 | IPR000626 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 172 | 1.57E-52 | IPR036890 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 155 | 236 | 1.27E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 178 | 237 | 3.4E-27 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 1 | 177 | 3.8E-63 | IPR036890 |
| SMART | SM00213 | ubq_7 | 174 | 237 | 7.7E-18 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 174 | 237 | 22.547636 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 200 | 225 | - | IPR019954 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 26 | 35 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 94 | 111 | 1.7E-54 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 119 | 141 | 1.7E-54 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 27 | 49 | 1.7E-54 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 76 | 93 | 1.7E-54 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 6 | 26 | 1.7E-54 | IPR020575 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56010.1 | heat shock protein 81-3. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Overexpression reduced tolerance to heat and conferred higher tolerance to calcium. | 4.53E-92 |
| RefSeq | XP_039816442.1 | heat shock protein 81-1-like [Panicum virgatum] | 3.43E-97 |
| A2YWQ1 | Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 SV=1 | 5.61E-96 | |
| TrEMBL | A0A3L6PMP6 | HATPase_c domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM14G18110 PE=3 SV=1 | 8.02E-103 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology