HalophFGD

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Basic Information
Locus ID: BH08.500
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: F-box LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
BH08 5179777 5180133 - BH08.500
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.02 12,816.73 Da 38.53 91.86 0.21
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 18 61 6.3E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 18 68 4.58E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 18 60 3.7E-11 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039853085.1 putative F-box/LRR-repeat protein 23 [Panicum virgatum] 2.15E-32
TrEMBL A0A3L6PTA0 F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM14G04130 PE=4 SV=1 2.12E-35
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH08.478, AH08.479, AH08.769, BH08.500, BH08.501, CH08.548 ...
CH08.550
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.