Basic Information
Locus ID:
BH08.2454
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
GDP-fucose protein O-fucosyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 31817472 | 31823657 | - | BH08.2454 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 90,150.63 Da | 48.15 | 68.37 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10250 | GDP-fucose protein O-fucosyltransferase | 395 | 668 | 6.8E-42 | IPR019378 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 785 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 760 | 779 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04910.1 | O-fucosyltransferase family protein. | 1.31E-179 |
| RefSeq | XP_039799417.1 | O-fucosyltransferase 1-like isoform X2 [Panicum virgatum] | 5.24E-258 |
| Q8W486 | O-fucosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=OFUT1 PE=2 SV=1 | 1.26E-178 | |
| TrEMBL | A0A8T0U724 | O-fucosyltransferase family protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG177177 PE=3 SV=1 | 1.19E-256 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 11 | AH03.1681, BH02.1694, BH03.321, BH04.871, BH07.2625 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_3AG0221350, gene-QOZ80_3BG0267940 ... |
| Poaceae | Oryza coarctata | 4 | Oco03G007240, Oco10G013850, Oco11G010490, Oco19G003500 |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_06G044000, gene-BS78_08G060500, gene-BS78_K024200 ... |
| Poaceae | Sporobolus alterniflorus | 9 | Chr01G030640, Chr01G034250, Chr03G009660, Chr05G004500 ... |
| Poaceae | Zea mays | 1 | Zm00001eb384270_P001 |
| Poaceae | Zoysia japonica | 11 | nbis-gene-1295, nbis-gene-27399, nbis-gene-33913 ... |