Basic Information
Locus ID:
BH08.2372
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK24
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 31092112 | 31094303 | - | BH08.2372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 63,882.64 Da | 42.52 | 76.92 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 491 | 548 | 3.4841E-11 | IPR002048 |
| CDD | cd00051 | EFh | 419 | 477 | 9.72104E-14 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 81 | 371 | 1.29533E-122 | - |
| Pfam | PF13499 | EF-hand domain pair | 490 | 547 | 1.1E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 422 | 478 | 4.9E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 151 | 372 | 1.7E-59 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 396 | 560 | 3.5E-39 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 77 | 383 | 8.63E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 76 | 125 | 2.2E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 380 | 1.6E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 141 | 199 | 5.0E-8 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 381 | 550 | 1.5E-46 | - |
| SMART | SM00054 | efh_1 | 491 | 519 | 0.76 | IPR002048 |
| SMART | SM00054 | efh_1 | 419 | 447 | 0.82 | IPR002048 |
| SMART | SM00054 | efh_1 | 455 | 483 | 0.91 | IPR002048 |
| SMART | SM00054 | efh_1 | 522 | 550 | 1.4E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 82 | 372 | 1.4E-92 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 415 | 450 | 13.537066 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 451 | 486 | 9.380651 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 518 | 553 | 12.7281 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 372 | 46.025265 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 487 | 514 | 10.105932 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 88 | 111 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 428 | 440 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 531 | 543 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 464 | 476 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 234 | 246 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 67 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 1.84E-191 |
| RefSeq | XP_039854959.1 | calcium-dependent protein kinase 21-like [Panicum virgatum] | 7.8900000020025E-315 |
| Q6ZIU9 | Calcium-dependent protein kinase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK21 PE=2 SV=1 | 9.03E-290 | |
| TrEMBL | A0A8T0RHG7 | Calcium-dependent protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_6KG390300 PE=4 SV=1 | 1.7800000000148E-313 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH08.2242, BH08.2372, CH08.2548 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0638190, gene-QOZ80_8BG0667730 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0686030.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_030419, gene-QYE76_061945 |
| Poaceae | Oryza coarctata | 2 | Oco15G013700, Oco16G012880 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g42750.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G210600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0403526 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr20G002420, Chr29G001060 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G466300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG034960, gene_TRIDC7BG026070 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G267000.1, TraesCS7B02G165200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb198360_P004 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17565 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g24464 |