Basic Information
Locus ID:
BH08.2231
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 29793416 | 29795398 | - | BH08.2231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 55,389.75 Da | 50.79 | 86.61 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 317 | 431 | 2.01744E-44 | - |
| CDD | cd00121 | MATH | 183 | 302 | 5.90541E-20 | IPR002083 |
| Pfam | PF00917 | MATH domain | 195 | 298 | 1.5E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 324 | 431 | 7.1E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 190 | 305 | 2.62E-20 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 310 | 433 | 3.31E-31 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 181 | 306 | 1.5E-17 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 307 | 430 | 1.3E-36 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 434 | 498 | 1.5E-16 | - |
| SMART | SM00225 | BTB_4 | 331 | 435 | 1.0E-24 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 180 | 302 | 13.28262 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 331 | 398 | 19.051167 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 5.61E-58 |
| RefSeq | XP_012702339.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 1.18E-152 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 5.44E-57 | |
| TrEMBL | A0A4U6UKZ0 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G222600v2 PE=4 SV=1 | 8.05E-168 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology