Basic Information
Locus ID:
BH08.2176
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 29181053 | 29183448 | + | BH08.2176 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 76,689.00 Da | 39.81 | 87.24 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 412 | 615 | 6.9E-23 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 80 | 1.8E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 131 | 191 | 1.5E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 224 | 4.16E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 412 | 683 | 6.51E-41 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 245 | 7.3E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 711 | 6.4E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 151 | 1.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 483 | 2.1E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 672 | 21.785454 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 720 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 2.54E-136 |
| RefSeq | XP_034601344.1 | pollen receptor-like kinase 4 [Setaria viridis] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 2.46E-135 | |
| TrEMBL | A0A4U6U693 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G218200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology