Basic Information
Locus ID:
BH08.2155
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 29012705 | 29016696 | + | BH08.2155 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 82,751.57 Da | 48.03 | 82.64 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01789 | PsbP | 89 | 244 | 1.6E-26 | IPR002683 |
| Pfam | PF00069 | Protein kinase domain | 457 | 747 | 1.3E-67 | IPR000719 |
| SUPERFAMILY | SSF55724 | Mog1p/PsbP-like | 91 | 243 | 2.46E-24 | IPR016123 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 452 | 751 | 8.36E-94 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 545 | 754 | 2.2E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 453 | 543 | 6.5E-30 | - |
| Gene3D | G3DSA:3.40.1000.10 | Mog1/PsbP, alpha/beta/alpha sandwich | 78 | 247 | 4.2E-28 | - |
| SMART | SM00220 | serkin_6 | 457 | 747 | 1.5E-93 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 457 | 747 | 46.011131 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 463 | 486 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 584 | 596 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 428 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20930.1 | cyclin-dependent kinase B2;2. Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. | 3.06E-171 |
| RefSeq | XP_025821922.1 | cyclin-dependent kinase B2-1 [Panicum hallii] | 4.88E-226 |
| Q0J4I1 | Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB2-1 PE=1 SV=1 | 2.12E-199 | |
| TrEMBL | K3XWZ5 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=3 SV=1 | 2.61E-235 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg10900 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8321 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah035787 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g013940 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39786, Sbi_jg55131 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg14558 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00013083 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl12401, Sgl17713 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000019068, gene:ENSEOMG00000033719 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0023620, CQ.Regalona.r1.1BG0000600 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30047970 |
| Apiaceae | Apium graveolens | 1 | Ag3G02586 |
| Arecaceae | Cocos nucifera | 1 | COCNU_08G004790 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103705217 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.1472.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G18079 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G76450.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10019042m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g31620.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g055490.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1412 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G1542 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno03g09540 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0117s00010.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g06640 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.31 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00037478 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb0G37713 |
| Poaceae | Echinochloa crus-galli | 3 | AH08.2046, BH08.2155, CH08.2326 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0636970, gene-QOZ80_8BG0665520 |
| Poaceae | Oryza coarctata | 2 | Oco15G011050, Oco16G011500 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g40160.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G187400 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0403773, Pt_Chr0403800 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr20G002000, Chr29G002360 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G437800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG031940, gene_TRIDC7BG022550 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G248600.1, TraesCS7B02G142700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb035340_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17422 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g24354 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.289, evm.TU.LG04.464 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g23620 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-30034 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4877 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16349 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000015l.589 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015283 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20808 |
| Salicaceae | Populus euphratica | 1 | populus_peu38454 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132604201 |
| Solanaceae | Solanum chilense | 1 | SOLCI007107200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107005168 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_1182 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G2388 |