Basic Information
Locus ID:
BH08.2066
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
heat shock
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 28284410 | 28292998 | - | BH08.2066 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 235,747.73 Da | 42.54 | 78.80 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09279 | RNase_HI_like | 1545 | 1669 | 3.88242E-47 | - |
| CDD | cd16927 | HATPase_Hsp90-like | 15 | 203 | 8.03085E-110 | - |
| CDD | cd01647 | RT_LTR | 1251 | 1364 | 2.17332E-43 | - |
| Pfam | PF17921 | Integrase zinc binding domain | 1777 | 1828 | 7.5E-6 | IPR041588 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1399 | 1503 | 2.1E-17 | IPR041577 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1272 | 1353 | 3.1E-12 | IPR000477 |
| Pfam | PF00665 | Integrase core domain | 1847 | 1936 | 5.8E-13 | IPR001584 |
| Pfam | PF13456 | Reverse transcriptase-like | 1550 | 1667 | 1.7E-19 | IPR002156 |
| Pfam | PF00183 | Hsp90 protein | 185 | 638 | 6.5E-215 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 28 | 182 | 3.0E-13 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 543 | 638 | 1.44E-26 | IPR037196 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 1842 | 1972 | 2.66E-29 | IPR012337 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 1544 | 1673 | 3.79E-20 | IPR012337 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 264 | 519 | 4.55E-108 | IPR020568 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1214 | 1530 | 4.78E-72 | IPR043502 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 214 | 4.78E-73 | IPR036890 |
| Gene3D | G3DSA:3.30.420.10 | - | 1546 | 1675 | 6.5E-30 | IPR036397 |
| Gene3D | G3DSA:1.20.120.790 | - | 519 | 641 | 1.5E-50 | IPR037196 |
| Gene3D | G3DSA:1.10.340.70 | - | 1771 | 1827 | 5.5E-7 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 263 | 431 | 6.0E-85 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 1290 | 1364 | 2.1E-26 | IPR043128 |
| Gene3D | G3DSA:3.30.565.10 | - | 3 | 229 | 2.8E-96 | IPR036890 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 1205 | 1258 | 3.6E-5 | - |
| Gene3D | G3DSA:3.30.420.10 | - | 1839 | 2018 | 4.8E-33 | IPR036397 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 1259 | 1289 | 2.1E-26 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 432 | 518 | 1.6E-40 | - |
| SMART | SM00387 | HKATPase_4 | 28 | 183 | 1.9E-8 | IPR003594 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 1839 | 1955 | 15.661482 | IPR001584 |
| ProSiteProfiles | PS50879 | RNase H domain profile. | 1541 | 1670 | 17.175722 | IPR002156 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 26 | 35 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 119 | 141 | 2.8E-80 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 171 | 188 | 2.8E-80 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 76 | 93 | 2.8E-80 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 6 | 26 | 2.8E-80 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 94 | 111 | 2.8E-80 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 189 | 207 | 2.8E-80 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 27 | 49 | 2.8E-80 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 3 | 666 | 26.35071 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1695 | 1723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 853 | 868 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 658 | 690 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1736 | 1771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 853 | 914 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 714 | - | - |
| Coils | Coil | Coil | 523 | 543 | - | - |
| Coils | Coil | Coil | 228 | 258 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_039816421.1 | heat shock protein 81-1-like [Panicum virgatum] | 0 |
| A2YWQ1 | Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835EMR5 | Uncharacterized protein OS=Digitaria exilis OX=1010633 GN=HU200_031248 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology