Basic Information
Locus ID:
BH08.2028
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 27972894 | 27974086 | - | BH08.2028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 41,238.66 Da | 54.21 | 77.53 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 42 | 1.5E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 48 | 4.45E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 54 | 3.5E-9 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 2.7E-9 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 52 | 9.656436 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 350 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025822450.1 | F-box protein At3g07870-like [Panicum hallii] | 6.06E-86 |
| TrEMBL | A0A8T0R3M7 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG263400 PE=4 SV=1 | 1.25E-110 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology