Basic Information
Locus ID:
BH08.2008
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 27794087 | 27795277 | + | BH08.2008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 43,201.03 Da | 53.80 | 77.27 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 41 | 3.3E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 42 | 7.59E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 49 | 3.6E-7 | - |
| SMART | SM00256 | fbox_2 | 8 | 49 | 1.1E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 97 | 303 | 5.6E-16 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49980.1 | F-box and associated interaction domains-containing protein. | 1.11E-7 |
| RefSeq | XP_025822450.1 | F-box protein At3g07870-like [Panicum hallii] | 6.53E-106 |
| Q9SN20 | Putative F-box protein At3g49980 OS=Arabidopsis thaliana OX=3702 GN=At3g49980 PE=4 SV=1 | 1.1E-6 | |
| TrEMBL | A0A368RPY1 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G194100v2 PE=4 SV=1 | 5.5E-150 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology