Basic Information
Locus ID:
BH08.2007
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 27791933 | 27793344 | + | BH08.2007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 47,574.07 Da | 46.95 | 74.13 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 4 | 41 | 5.4E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 44 | 1.7E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 43 | 2.6E-6 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 0.0057 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 95 | 314 | 7.7E-24 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974816.1 | F-box protein At3g07870 [Setaria italica] | 1.24E-55 |
| TrEMBL | A0A835DUF7 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_065718 PE=4 SV=1 | 1.03E-116 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology