Basic Information
Locus ID:
BH08.2006
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 27788557 | 27789919 | + | BH08.2006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 44,147.70 Da | 49.55 | 82.97 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 42 | 9.6E-8 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 82 | 207 | 6.54E-5 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 42 | 8.5E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 43 | 4.7E-7 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 3.1E-7 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 67 | 252 | 3.2E-18 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 53 | 8.994076 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974816.1 | F-box protein At3g07870 [Setaria italica] | 1.17E-61 |
| TrEMBL | A0A835FGJ5 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_012297 PE=4 SV=1 | 5.17E-121 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology