Basic Information
Locus ID:
BH08.1734
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 25145472 | 25148798 | - | BH08.1734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 75,874.97 Da | 41.49 | 89.68 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 294 | 325 | 2.59177E-8 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 661 | 1.9E-45 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 30 | 68 | 8.4E-8 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 294 | 328 | 1.8E-7 | IPR001881 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 403 | 661 | 6.29E-67 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 291 | 326 | 1.24E-8 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 243 | 334 | 4.1E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 474 | 678 | 4.5E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 381 | 473 | 1.4E-20 | - |
| SMART | SM00181 | egf_5 | 297 | 335 | 0.1 | IPR000742 |
| SMART | SM00181 | egf_5 | 246 | 293 | 23.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 294 | 335 | 4.0E-8 | IPR001881 |
| SMART | SM00220 | serkin_6 | 401 | 664 | 7.3E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 665 | 35.919453 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 294 | 330 | 9.503986 | IPR000742 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 309 | 320 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 407 | 429 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 517 | 529 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 294 | 318 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 3.88E-114 |
| RefSeq | XP_034600688.1 | wall-associated receptor kinase 2-like [Setaria viridis] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 3.76E-113 | |
| TrEMBL | A0A1E5W6K3 | Wall-associated receptor kinase 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology