Basic Information
Locus ID:
BH08.1648
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 24069742 | 24077229 | + | BH08.1648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 45,885.58 Da | 54.40 | 84.29 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 130 | 169 | 4.2E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 130 | 171 | 6.32E-5 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 181 | 277 | 5.89E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 349 | 3.5E-11 | IPR032675 |
| ProSitePatterns | PS00198 | 4Fe-4S ferredoxin-type iron-sulfur binding region signature. | 337 | 348 | - | IPR017900 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 1.91E-50 |
| RefSeq | XP_025820383.1 | F-box protein SKIP28-like [Panicum hallii] | 1.54E-214 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 1.86E-49 | |
| TrEMBL | A0A2S3I2J8 | F-box domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_6G205400 PE=4 SV=1 | 3.48E-213 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology