Basic Information
Locus ID:
BH08.1364
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 20188139 | 20190213 | + | BH08.1364 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 68,701.09 Da | 45.95 | 99.14 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 362 | 559 | 3.3E-22 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 186 | 1.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 76 | 1.8E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 222 | 3.06E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 362 | 634 | 6.7E-42 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 654 | 8.9E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 353 | 433 | 4.6E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 239 | 5.8E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 148 | 5.8E-23 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 358 | 639 | 25.969118 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17840.1 | receptor-like kinase 902. Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. | 1.1E-103 |
| RefSeq | XP_034601289.1 | probable inactive receptor kinase RLK902 [Setaria viridis] | 2.03E-277 |
| Q9LVI6 | Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana OX=3702 GN=RLK902 PE=1 SV=1 | 1.06E-102 | |
| TrEMBL | A0A3L6RMT2 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM13G12890 PE=4 SV=1 | 4.05E-280 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology