Basic Information
Locus ID:
BH08.1258
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK24
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 18464447 | 18465145 | - | BH08.1258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.59 | 24,338.14 Da | 53.54 | 69.48 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 77 | 217 | 1.43E-12 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 73 | 231 | 4.8E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 232 | 11.863386 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.3 | - | 7.3E-25 |
| RefSeq | XP_039854959.1 | calcium-dependent protein kinase 21-like [Panicum virgatum] | 1.05E-62 |
| Q6ZIU9 | Calcium-dependent protein kinase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK21 PE=2 SV=1 | 7.13E-37 | |
| TrEMBL | A0A8T0RHG7 | Calcium-dependent protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_6KG390300 PE=4 SV=1 | 2.37E-61 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||