Basic Information
Locus ID:
BH08.1147
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 16702837 | 16706231 | - | BH08.1147 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 79,441.55 Da | 38.08 | 88.15 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 351 | 387 | 2.68094E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 461 | 726 | 1.0E-44 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 351 | 387 | 5.7E-7 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 40 | 80 | 8.5E-9 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 350 | 390 | 9.57E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 461 | 728 | 3.24E-66 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 307 | 394 | 2.0E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 535 | 739 | 3.0E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 435 | 534 | 1.2E-21 | - |
| SMART | SM00179 | egfca_6 | 351 | 394 | 8.8E-8 | IPR001881 |
| SMART | SM00220 | serkin_6 | 460 | 729 | 1.9E-33 | IPR000719 |
| SMART | SM00181 | egf_5 | 296 | 350 | 43.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 354 | 394 | 0.01 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 460 | 729 | 37.912346 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 351 | 394 | 10.646597 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 351 | 378 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 369 | 380 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 466 | 488 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 2.6E-99 |
| RefSeq | XP_039853753.1 | wall-associated receptor kinase 1-like [Panicum virgatum] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 2.53E-98 | |
| TrEMBL | A0A2T7D685 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G146900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology