Basic Information
Locus ID:
BH08.1135
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 16430263 | 16434954 | + | BH08.1135 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 73,509.66 Da | 41.98 | 94.11 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 124 | 171 | 1.8E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 132 | 499 | 4.08E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 501 | 646 | 2.05E-11 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 214 | 322 | 7.4E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 518 | 658 | 9.6E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 501 | 7.4E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 122 | 213 | 6.1E-19 | IPR032675 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 200 | 213 | 4.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 440 | 453 | 4.7E-5 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47580.1 | Leucine-rich repeat protein kinase family protein. | 1.67E-16 |
| RefSeq | XP_015613260.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Oryza sativa Japonica Group] | 7.33E-61 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 3.79E-15 | |
| TrEMBL | A0A5J9V5G0 | LRRNT_2 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_22288 PE=4 SV=1 | 1.07E-72 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH08.1135 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G036300 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4AG070000 |