Basic Information
Locus ID:
BH08.1134
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 16380403 | 16381652 | + | BH08.1134 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 41,861.94 Da | 42.39 | 87.32 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 47 | 172 | 1.2962E-19 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 213 | 282 | 8.8E-8 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 48 | 179 | 2.13E-20 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 210 | 282 | 3.85E-7 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 286 | 357 | 6.9E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 197 | 285 | 2.2E-10 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 45 | 179 | 4.7E-16 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 45 | 174 | 13.84515 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015649261.1 | BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group] | 4.81E-78 |
| Q2M2N2 | Speckle-type POZ protein-like OS=Mus musculus OX=10090 GN=Spopl PE=2 SV=3 | 4.71E-11 | |
| TrEMBL | A0A3L6RJU3 | BTB domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM13G10060 PE=4 SV=1 | 5.26E-167 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH08.1134 |
| Poaceae | Oryza coarctata | 2 | Oco15G006580, Oco16G006400 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g25240.1 |