Basic Information
Locus ID:
BH08.105
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH08 | 1005722 | 1008957 | + | BH08.105 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 72,920.97 Da | 38.03 | 92.70 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 423 | 686 | 1.06635E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 73 | 1.0E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 422 | 686 | 6.6E-33 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 173 | 232 | 1.6E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 243 | 2.93E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 686 | 4.19E-50 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 267 | 4.0E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 496 | 690 | 2.2E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 145 | 3.1E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 495 | 2.1E-24 | - |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 171 | 8.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 219 | 27.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 690 | 26.619282 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 297 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 2.56E-160 |
| RefSeq | XP_025821391.1 | probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Panicum hallii] | 0 |
| Q9FXF2 | Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana OX=3702 GN=RKF1 PE=1 SV=1 | 6.51E-44 | |
| TrEMBL | A0A2T7D2V3 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G015900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology