Basic Information
Locus ID:
BH07.913
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
XRN4
Description:
XRN 5'-3' exonuclease N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 8583283 | 8584089 | - | BH07.913 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 24,400.78 Da | 65.42 | 75.16 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.12390 | - | 75 | 168 | 3.3E-6 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54490.1 | exoribonuclease 4. Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing. | 1.03E-20 |
| RefSeq | XP_025793560.1 | 5'-3' exoribonuclease 4 [Panicum hallii] | 3.34E-28 |
| Q9FQ04 | 5'-3' exoribonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=XRN4 PE=1 SV=1 | 1.02E-19 | |
| TrEMBL | A0A811MLB1 | CCHC-type domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS4673 PE=4 SV=1 | 3.4E-32 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||